Detailed information of matrix profile MA1113.2

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Profile summary
Name: PBX2
Matrix ID: MA1113.2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 12054735
Uniprot ID: P40425  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 8363 8307 4925 26620 225 24368 27245 27259 704 2298 25945 6993 7897 ]
C [ 5863 8859 19645 629 588 2266 574 754 453 23894 848 7057 7086 ]
G [ 9625 3047 1585 1710 317 817 343 569 327 555 352 3952 5574 ]
T [ 5745 9383 3441 637 28466 2145 1434 1014 28112 2849 2451 11594 9039 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1113.1 MA1113 1 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA1113.2 MA1113 2 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA1113.3 MA1113 3 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     

-log(P-value) = 1415.15

TFFM details

TFFM ID: TFFM0146.2

ChIP-seq Centrality
-log(P-value): 11798.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0146.2

ChIP-seq Centrality
-log(P-value): 10842.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: