Detailed information of matrix profile MA1115.1

  1. Home
  2. Matrix > MA1115.1

Profile summary
Name: POU5F1
Matrix ID: MA1115.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23747866
Uniprot ID: Q01860  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 3637 6383 307 838 1108 1723 634 12834 70 4818 4846 ]
C [ 3551 2071 257 1026 118 548 11571 67 229 1908 1996 ]
G [ 2450 2104 270 690 132 10310 192 130 122 2785 1290 ]
T [ 3476 2556 12280 10560 11756 533 717 83 12693 3603 4982 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1115.1 MA1115 1 POU5F1 Homo sapiens
POU domain factors Homeo domain factors
MA1115.2 MA1115 2 POU5F1 Homo sapiens
POU domain factors Homeo domain factors
     

-log(P-value) = 75.387

TFFM details

TFFM ID: TFFM0148.1

ChIP-seq Centrality
-log(P-value): 1710.71

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0148.1

ChIP-seq Centrality
-log(P-value): 1456.82

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: