Detailed information of matrix profile MA1154.1

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Profile summary
Name: ZNF282
Matrix ID: MA1154.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 28092692
Uniprot ID: Q9UDV7  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 51 43 129 2 7 3 2 61 126 21 2 1 0 380 387 378 45 ]
C [ 97 60 297 2 2 4 0 37 2 0 3 0 2 3 8 7 50 ]
G [ 98 40 0 210 44 210 0 3 132 99 205 208 209 2 0 21 196 ]
T [ 44 157 14 1 242 2 277 256 12 140 0 0 0 3 16 39 21 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1154.1 MA1154 1 ZNF282 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1154.2 MA1154 2 ZNF282 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0638.1

ChIP-seq Centrality
-log(P-value): 511.469

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0638.1

ChIP-seq Centrality
-log(P-value): 419.595

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: