Detailed information of matrix profile MA1155.1

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Profile summary
Name: ZSCAN4
Matrix ID: MA1155.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 28092692
Uniprot ID: Q8NAM6  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 229 1 6 362 218 1699 2 8 73 2 0 2 0 0 1373 ]
C [ 365 2 0 230 1873 75 0 320 0 2 0 0 1 1737 112 ]
G [ 200 0 279 107 50 11 1684 374 1702 0 1665 0 1676 2 383 ]
T [ 1000 1269 1225 1118 3 8 7 772 3 1281 0 1292 0 290 257 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1155.1 MA1155 1 ZSCAN4 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0831.1

ChIP-seq Centrality
-log(P-value): 2758.33

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0831.1

ChIP-seq Centrality
-log(P-value): 2674.03

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: