Detailed information of matrix profile MA1163.2

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Profile summary
Name: PHL11
Matrix ID: MA1163.2
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 25215497 25215497
Uniprot ID: C0SVS4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 835 795 1171 48 1845 2079 7 2045 23 150 67 128 531 619 ]
C [ 310 337 237 21 101 3 9 52 8 16 1977 575 451 352 ]
G [ 352 453 579 1980 16 8 51 9 3 100 20 237 337 309 ]
T [ 616 528 126 64 151 23 2046 7 2079 1847 49 1173 794 833 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1163.1 MA1163 1 PHL11 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
MA1163.2 MA1163 2 PHL11 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
MA1163.3 MA1163 3 PHL11 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
     

-log(P-value) = 888.944

TFFM details

TFFM ID: TFFM0832.1

ChIP-seq Centrality
-log(P-value): 1503.53

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0832.1

ChIP-seq Centrality
-log(P-value): 1505.91

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: