| Name: | Brachyury |
| Matrix ID: | MA1846.1 |
| Class: | T-Box factors |
| Family: | Brachyury-related factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | Q4H3U3 |
| Source: | 31267468 |
| Comment: |
| A [ | 235 | 228 | 368 | 357 | 431 | 281 | 214 | 53 | 130 | 713 | 14 | 919 | 43 | 130 | 114 | 340 | 228 | 239 | 166 | 162 | 245 | 208 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 314 | 284 | 247 | 232 | 184 | 187 | 203 | 56 | 711 | 56 | 961 | 27 | 877 | 658 | 146 | 237 | 292 | 231 | 265 | 139 | 317 | 244 | ] |
| G [ | 214 | 251 | 192 | 195 | 154 | 153 | 160 | 23 | 107 | 178 | 7 | 41 | 28 | 104 | 44 | 199 | 225 | 348 | 119 | 544 | 156 | 280 | ] |
| T [ | 238 | 237 | 194 | 215 | 231 | 379 | 423 | 868 | 53 | 53 | 18 | 13 | 52 | 108 | 696 | 224 | 256 | 181 | 450 | 155 | 281 | 268 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1846.1 | MA1846 | 1 | Brachyury |
Ciona intestinalis
|
Brachyury-related factors | T-Box factors |  |
| MA1846.2 | MA1846 | 2 | Brachyury |
Ciona intestinalis
|
Brachyury-related factors | T-Box factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: