| Name: | Hnf1 |
| Matrix ID: | MA1882.1 |
| Class: | Homeo domain factors |
| Family: | POU domain factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | Q4H3D7 |
| Source: | 31267468 |
| Comment: |
| A [ | 452 | 322 | 290 | 307 | 273 | 372 | 386 | 102 | 29 | 946 | 942 | 24 | 38 | 540 | 288 | 260 | 307 | 307 | 320 | 420 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 95 | 115 | 149 | 192 | 203 | 214 | 200 | 170 | 32 | 16 | 13 | 35 | 29 | 68 | 253 | 241 | 197 | 177 | 144 | 117 | ] |
| G [ | 103 | 122 | 166 | 204 | 186 | 188 | 239 | 121 | 8 | 22 | 27 | 24 | 55 | 254 | 262 | 204 | 186 | 158 | 136 | 117 | ] |
| T [ | 350 | 441 | 395 | 297 | 338 | 227 | 175 | 607 | 931 | 16 | 18 | 916 | 878 | 138 | 196 | 295 | 310 | 358 | 400 | 346 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1882.1 | MA1882 | 1 | Hnf1 |
Ciona intestinalis
|
POU domain factors | Homeo domain factors |  |
| MA1882.2 | MA1882 | 2 | Hnf1 |
Ciona intestinalis
|
POU domain factors | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: