| Name: | Prop |
| Matrix ID: | MA1909.1 |
| Class: | Homeo domain factors |
| Family: | Paired-related HD factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | Q4H2X0 |
| Source: | 31267468 |
| Comment: |
| A [ | 242 | 251 | 363 | 464 | 198 | 200 | 271 | 843 | 861 | 35 | 39 | 847 | 757 | 314 | 193 | 260 | 334 | 319 | 258 | 271 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 225 | 198 | 160 | 152 | 241 | 264 | 219 | 46 | 32 | 28 | 57 | 38 | 79 | 213 | 221 | 247 | 228 | 245 | 256 | 262 | ] |
| G [ | 252 | 214 | 237 | 194 | 182 | 193 | 159 | 63 | 39 | 16 | 24 | 55 | 92 | 188 | 160 | 172 | 208 | 221 | 185 | 187 | ] |
| T [ | 281 | 337 | 240 | 190 | 379 | 343 | 351 | 48 | 69 | 922 | 881 | 60 | 72 | 285 | 426 | 320 | 230 | 215 | 300 | 280 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1909.1 | MA1909 | 1 | Prop |
Ciona intestinalis
|
Paired-related HD factors | Homeo domain factors |  |
| MA1909.2 | MA1909 | 2 | Prop |
Ciona intestinalis
|
Paired-related HD factors | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: