Detailed information of matrix profile MA1937.1

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Profile summary
Name: ERF::HOXB13
Matrix ID: MA1937.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P50548   Q92826  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 441 428 294 1253 2141 287 554 1184 37 725 41 36 7 35 247 316 ]
C [ 503 284 86 355 98 1074 335 93 1296 84 28 2141 2141 249 484 656 ]
G [ 501 463 18 213 175 94 634 795 193 284 49 0 4 1597 960 427 ]
T [ 696 2141 2141 2141 21 1067 619 69 845 2141 2141 28 19 545 450 741 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1937.1 MA1937 1 ERF::HOXB13 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
MA1937.2 MA1937 2 ERF::HOXB13 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: