Detailed information of matrix profile MA1940.1

  1. Home
  2. Matrix > MA1940.1

Profile summary
Name: ETV2::DRGX
Matrix ID: MA1940.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: A6NNA5   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 963 505 409 0 0 1566 1566 416 50 1566 1566 10 163 1566 ]
C [ 214 985 1566 5 2 7 94 235 730 250 165 26 178 43 ]
G [ 603 581 67 1566 1566 6 23 870 98 380 137 22 47 73 ]
T [ 300 162 2 0 4 13 600 45 836 220 122 1566 1566 233 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1940.1 MA1940 1 ETV2::DRGX Homo sapiens
Ets-related::Paired-related HD factors Tryptophan cluster factors::Homeo domain factors
MA1940.2 MA1940 2 ETV2::DRGX Homo sapiens
Ets-related::Paired-related HD factors Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: