Detailed information of matrix profile UN0067.1

  1. Home
  2. Matrix > UN0067.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: PK25034.1
Matrix ID: UN0067.1
Class: Homeo domain factors
Family: TALE-type HD
Collection: UNVALIDATED
Taxon: Plants
Species: Cannabis sativa
Data Type: PBM
Validation:
Uniprot ID:
Source: 31133749
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 408 166 316 97 48 35 15 711 289 302 ]
C [ 159 328 496 253 1 0 929 50 310 217 ]
G [ 209 381 94 106 929 0 28 98 175 185 ]
T [ 222 123 91 542 20 963 25 139 223 293 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0067.1 UN0067 1 PK25034.1 Cannabis sativa
TALE-type HD Homeo domain factors
UN0067.2 UN0067 2 PK25034.1 Cannabis sativa
TALE-type HD Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: