Detailed information of matrix profile UN0082.1

  1. Home
  2. Matrix > UN0082.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HCAG_04779
Matrix ID: UN0082.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Fungi
Species: Histoplasma capsulatum
Data Type: PBM
Validation:
Uniprot ID: A6R571  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 334 132 23 379 0 1 5 20 149 429 ]
C [ 151 141 2 533 1 0 981 5 516 193 ]
G [ 233 151 963 84 997 998 2 122 218 126 ]
T [ 279 574 9 2 0 0 9 851 116 250 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0082.1 UN0082 1 HCAG_04779 Histoplasma capsulatum
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0082.2 UN0082 2 HCAG_04779 Histoplasma capsulatum
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: