Detailed information of matrix profile UN0088.1

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Profile summary

Name: NCU01629
Matrix ID: UN0088.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Fungi
Species: Neurospora crassa
Data Type: PBM
Validation:
Uniprot ID: Q1K4M4  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 186 94 5 0 28 290 55 766 ]
C [ 64 605 0 286 956 0 714 23 ]
G [ 718 72 993 698 0 692 3 138 ]
T [ 30 227 0 13 14 16 226 71 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0088.1 UN0088 1 NCU01629 Neurospora crassa
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: