Detailed information of matrix profile UN0097.1

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Profile summary

Name: sub-1
Matrix ID: UN0097.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: UNVALIDATED
Taxon: Fungi
Species: Neurospora crassa
Data Type: PBM
Validation:
Uniprot ID: V5IL92  
Source: 31133749
Comment:

Sequence logo

Frequency matrix

         
A [ 225 567 25 102 0 999 0 0 24 105 224 ]
C [ 225 144 509 897 0 0 0 999 24 391 224 ]
G [ 324 144 117 0 999 0 0 0 724 299 326 ]
T [ 225 144 347 0 0 0 999 0 225 203 224 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0097.1 UN0097 1 sub-1 Neurospora crassa
C4-GATA-related Other C4 zinc finger-type factors
UN0097.2 UN0097 2 sub-1 Neurospora crassa
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: