Detailed information of matrix profile UN0100.1

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Profile summary

Name: PGTG_04827
Matrix ID: UN0100.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Fungi
Species: Puccinia graminis
Data Type: PBM
Validation:
Uniprot ID: E3K314  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 395 101 0 0 0 1 105 137 ]
C [ 320 647 915 997 988 20 96 137 ]
G [ 183 57 0 0 0 0 562 382 ]
T [ 100 193 83 1 10 977 235 342 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0100.1 UN0100 1 PGTG_04827 Puccinia graminis
C2H2 zinc finger factors
UN0100.2 UN0100 2 PGTG_04827 Puccinia graminis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: