Detailed information of matrix profile UN0111.1

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Profile summary

Name: ATF6B
Matrix ID: UN0111.1
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q99941  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 1982 365 4407 217 21938 16 31 4 287 21938 417 4153 ]
C [ 8224 94 21938 21938 135 21938 73 56 21938 137 13028 11544 ]
G [ 1656 21938 36 6 3 21 21938 136 113 248 2722 3308 ]
T [ 21938 524 54 245 0 26 25 21938 29 30 8910 2932 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0110.1 UN0110 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0111.1 UN0111 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0112.1 UN0112 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0110.2 UN0110 2 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0111.2 UN0111 2 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: