Detailed information of matrix profile UN0130.1

This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: IRX3
Matrix ID: UN0130.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P78415  
Source: 28473536
Comment: not supported by literature (PMID:22923612 consensus = ACAnnTGT)

Sequence logo

Frequency matrix

A [ 3636 12686 18 12686 4569 2319 6019 5806 5789 6173 5255 2958 370 12686 0 145 32 6804 ]
C [ 2 73 12686 0 6163 1454 2038 791 472 427 916 1832 12686 24 2 5 0 2303 ]
G [ 2284 0 1 2 28 12686 1858 882 461 481 845 2056 1342 6050 0 12686 74 15 ]
T [ 6765 34 154 4 12686 306 2773 5207 5964 5606 5670 5840 2021 4491 12686 22 12686 3566 ]

Binding sites information

No Binding sites available for this model.

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