Detailed information of matrix profile UN0205.1

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Profile summary

Name: ZNF580
Matrix ID: UN0205.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9UK33  
Source: 28473536
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 30 17 0 121 10 6 12 26 18 43 39 5 4 121 6 6 16 17 ]
C [ 106 112 35 24 121 121 113 44 61 18 99 119 21 28 120 120 110 48 ]
G [ 43 1 3 0 1 4 4 3 10 30 27 4 4 6 0 2 8 4 ]
T [ 7 0 121 14 1 2 6 101 34 29 6 6 123 7 2 1 18 67 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0205.1 UN0205 1 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0206.1 UN0206 1 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0206.2 UN0206 2 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: