Detailed information of matrix profile UN0248.1

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Profile summary

Name: ZSCAN5A
Matrix ID: UN0248.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9BUG6  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 3916 4000 2792 2334 1670 747 998 2380 6699 2289 4463 347 15384 16091 15058 3536 4688 2073 ]
C [ 5661 6708 1345 1038 15082 15901 15475 9397 13734 15544 13989 15897 502 15 348 1395 10739 6934 ]
G [ 3580 2703 14535 1979 3772 119 421 1850 4003 251 4541 17 2638 2 3963 4818 697 2479 ]
T [ 2953 8498 4787 15143 190 12 1180 5852 2720 482 3043 430 255 37 122 6361 2897 4624 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0248.1 UN0248 1 ZSCAN5A Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
UN0248.2 UN0248 2 ZSCAN5A Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: