Detailed information of matrix profile UN0249.1

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Profile summary

Name: ZSCAN9
Matrix ID: UN0249.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O15535  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 4895 6979 1871 0 11523 298 11521 11520 0 11521 1 11517 11523 0 11291 11451 859 1285 8117 1645 ]
C [ 1268 809 577 2 0 126 13 3 0 0 0 0 0 3 648 2 2405 10443 2230 4570 ]
G [ 3706 3761 8112 11521 2 12 3 3 11523 2 0 8 2 11523 2 64 2686 307 1496 2231 ]
T [ 1654 505 2688 0 0 11446 296 2 0 0 11523 0 2 12 0 116 5573 1293 1523 3076 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0249.1 UN0249 1 ZSCAN9 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
UN0249.2 UN0249 2 ZSCAN9 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: