Detailed information of matrix profile UN0271.1

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Profile summary

Name: gtaJ
Matrix ID: UN0271.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: UNVALIDATED
Taxon: Dictyostelium
Species: Dictyostelium discoideum
Data Type: PBM
Validation:
Uniprot ID: Q54TE3  
Source: 31133749
Comment:

Sequence logo

Frequency matrix

         
A [ 252 315 119 692 70 937 24 67 60 383 ]
C [ 221 171 404 230 46 23 0 912 134 134 ]
G [ 175 243 134 32 876 13 15 5 106 357 ]
T [ 350 269 341 45 5 25 959 13 698 125 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0271.1 UN0271 1 gtaJ Dictyostelium discoideum
C4-GATA-related Other C4 zinc finger-type factors
UN0271.2 UN0271 2 gtaJ Dictyostelium discoideum
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: