Detailed information of matrix profile UN0273.1

  1. Home
  2. Matrix > UN0273.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: v1g160868
Matrix ID: UN0273.1
Class: Homeo domain factors
Family: POU domain factors
Collection: UNVALIDATED
Taxon: Cnidaria
Species: Nematostella vectensis
Data Type: PBM
Validation:
Uniprot ID: A7RNB5  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 327 687 0 90 897 999 83 102 718 279 ]
C [ 257 76 0 0 102 0 0 0 93 173 ]
G [ 156 76 0 102 0 0 0 190 93 266 ]
T [ 258 159 999 806 0 0 916 707 93 280 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0273.1 UN0273 1 v1g160868 Nematostella vectensis
POU domain factors Homeo domain factors
UN0273.2 UN0273 2 v1g160868 Nematostella vectensis
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: