Detailed information of matrix profile UN0354.1

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Profile summary

Name: AT3G42860
Matrix ID: UN0354.1
Class: CH3
Family: GRF
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9M1L9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 431 342 180 79 4 3 5 1283 4 23 213 264 ]
C [ 165 301 871 6 3 2 1 2 1268 166 170 199 ]
G [ 357 305 114 1136 1 5 1271 2 6 26 100 198 ]
T [ 334 339 122 66 1279 1277 10 0 9 1072 804 626 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0354.1 UN0354 1 AT3G42860 Arabidopsis thaliana
GRF CH3
UN0354.2 UN0354 2 AT3G42860 Arabidopsis thaliana
GRF C3H zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: