Detailed information of matrix profile UN0355.1

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Profile summary

Name: AT3G49930
Matrix ID: UN0355.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SN24  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 475 454 79 26 1049 12 34 29 951 413 466 ]
C [ 119 74 19 14 30 11 42 17 39 131 146 ]
G [ 205 362 139 7 5 1078 1013 10 90 286 290 ]
T [ 325 234 887 1077 40 23 35 1068 44 294 222 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0355.1 UN0355 1 AT3G49930 Arabidopsis thaliana
C2H2 zinc finger factors
UN0355.2 UN0355 2 AT3G49930 Arabidopsis thaliana
C2H2 C2H2 zinc finger factors
     

-log(P-value) = 379.729

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: