Detailed information of matrix profile UN0359.1

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Profile summary

Name: BHLH28
Matrix ID: UN0359.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LUK7  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 1000 669 247 22 10 2725 11 50 83 2012 586 953 908 870 836 ]
C [ 436 581 509 19 12 9 2716 16 12 291 1141 559 610 481 525 ]
G [ 489 455 261 2699 12 4 5 2660 2536 51 287 548 514 657 581 ]
T [ 823 1043 1731 8 2714 10 16 22 117 394 734 688 716 740 806 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0359.1 UN0359 1 BHLH28 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
UN0359.2 UN0359 2 BHLH28 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 3740.98

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: