Detailed information of matrix profile UN0389.1

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Profile summary

Name: AT1G66420
Matrix ID: UN0389.1
Class: GeBP/Storekeeper
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9C517  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 358 132 566 585 208 585 434 698 94 0 19 1000 19 698 981 0 94 151 151 ]
C [ 340 245 170 113 75 57 0 38 132 0 0 0 0 0 0 151 57 208 75 ]
G [ 94 170 57 226 434 19 38 132 0 981 981 0 0 189 19 528 660 75 38 ]
T [ 208 453 208 75 283 340 528 132 774 19 0 0 981 113 0 321 189 566 736 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0389.1 UN0389 1 AT1G66420 Arabidopsis thaliana
GeBP/Storekeeper
UN0389.2 UN0389 2 AT1G66420 Arabidopsis thaliana
Storekeeper Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: