Detailed information of matrix profile UN0394.1

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Profile summary

Name: AtPLATZ6
Matrix ID: UN0394.1
Class: CHC2-C2H2-C4 zinc finger factors
Family: Platz
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: A8MQN6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 580 5 968 922 75 288 98 13 3 0 778 2 960 700 248 ]
C [ 70 7 5 8 238 337 42 0 985 142 37 10 7 57 187 ]
G [ 308 988 3 17 550 188 12 7 5 47 183 988 8 110 378 ]
T [ 42 0 23 53 137 187 848 980 7 812 2 0 25 133 187 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0394.1 UN0394 1 AtPLATZ6 Arabidopsis thaliana
Platz CHC2-C2H2-C4 zinc finger factors
UN0394.2 UN0394 2 AtPLATZ6 Arabidopsis thaliana
PLATZ
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: