Detailed information of matrix profile UN0394.1

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Profile summary

Name: AtPLATZ6
Matrix ID: UN0394.1
Class: CHC2-C2H2-C4 zinc finger factors
Family: Platz
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: A8MQN6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 187 133 25 0 2 812 7 980 848 187 137 53 23 0 42 ]
C [ 378 110 8 988 183 47 5 7 12 188 550 17 3 988 308 ]
G [ 187 57 7 10 37 142 985 0 42 337 238 8 5 7 70 ]
T [ 248 700 960 2 778 0 3 13 98 288 75 922 968 5 580 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0394.1 UN0394 1 AtPLATZ6 Arabidopsis thaliana
Platz CHC2-C2H2-C4 zinc finger factors
UN0394.2 UN0394 2 AtPLATZ6 Arabidopsis thaliana
PLATZ
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: