Detailed information of matrix profile UN0400.1

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Profile summary

Name: HMGB15
Matrix ID: UN0400.1
Class: ARID
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9MAT6  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 571 781 692 984 22 130 727 0 997 13 692 495 6 952 292 813 ]
C [ 105 54 19 0 787 229 0 0 0 22 41 79 6 0 0 35 ]
G [ 70 63 63 6 60 0 0 0 3 57 60 83 6 0 13 83 ]
T [ 254 102 225 10 130 641 273 1000 0 908 206 343 981 48 695 70 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0400.1 UN0400 1 HMGB15 Arabidopsis thaliana
ARID
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: