Detailed information of matrix profile UN0415.1

  1. Home
  2. Matrix > UN0415.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: YAB1
Matrix ID: UN0415.1
Class: High-mobility group (HMG) domain factors
Family: YABBY
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation:
Uniprot ID: O22152  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 1 333 886 222 112 997 1 200 ]
C [ 1 1 1 1 112 1 1 2 ]
G [ 1 112 1 1 112 1 1 2 ]
T [ 996 554 112 775 665 1 997 796 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0415.1 UN0415 1 YAB1 Arabidopsis thaliana
YABBY High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: