Detailed information of matrix profile UN0416.1

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Profile summary

Name: YAB5
Matrix ID: UN0416.1
Class: Other C4 zinc finger-type factors
Family: YABBY
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation:
Uniprot ID: Q8GW46  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 305 765 147 625 903 94 95 905 348 283 200 328 ]
C [ 198 78 51 121 96 0 0 94 52 276 297 224 ]
G [ 299 78 51 227 0 96 0 0 153 172 303 224 ]
T [ 198 78 752 26 0 809 904 0 447 270 200 224 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0416.1 UN0416 1 YAB5 Arabidopsis thaliana
YABBY Other C4 zinc finger-type factors
UN0416.2 UN0416 2 YAB5 Arabidopsis thaliana
YABBY High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: