JASPAR - LEC1-A - UN0424.1 - profile summary

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Profile summary

Name:	LEC1-A
Matrix ID:	UN0424.1
Class:	Heteromeric CCAAT-binding factors
Family:	NF-YB
Collection:	UNVALIDATED
Taxon:	Plants
Species:	Glycine max
Data Type:	ChIP-seq
Validation:
Uniprot ID:	B5KMS8
Source:	28739919
Comment:	TF has several motif variants. The ab used for ChIP was done using recombinant protein containing regions shared by LEC1-A and LEC1-B. Therefore the profile could be for either or both LEC1-A and B.

Sequence logo

Frequency matrix

A [	6015	5640	209	16937	420	17522	741	12654	699	5298	4745	]
C [	3447	3307	141	766	17337	455	16842	821	713	2900	3654	]
G [	4587	3454	17815	422	540	357	508	4176	590	6859	3845	]
T [	4900	6548	784	824	652	615	858	1298	16947	3892	6705	]

Binding sites information

External links

Matrix ID	Base ID	Version	Name	Species	Family	Class
UN0422.1	UN0422	1	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0423.1	UN0423	1	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0424.1	UN0424	1	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0422.2	UN0422	2	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0423.2	UN0423	2	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0424.2	UN0424	2	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors