Detailed information of matrix profile UN0428.1

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Profile summary

Name: ONAC127
Matrix ID: UN0428.1
Class: GCM domain factors
Family: NAC
Collection: UNVALIDATED
Taxon: Plants
Species: Oryza sativa
Data Type: ChIP-seq
Validation:
Uniprot ID: Q2R3N4  
Source: 33476364
Comment:

Sequence logo

Frequency matrix

         
A [ 1 7 0 0 0 0 0 0 3 3 ]
C [ 11 4 0 20 0 0 20 20 11 10 ]
G [ 3 2 20 0 0 20 0 0 4 3 ]
T [ 5 7 0 0 20 0 0 0 2 4 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0428.1 UN0428 1 ONAC127 Oryza sativa
NAC GCM domain factors
UN0429.1 UN0429 1 ONAC127 Oryza sativa
NAC GCM domain factors
UN0430.1 UN0430 1 ONAC127 Oryza sativa
NAC GCM domain factors
UN0428.2 UN0428 2 ONAC127 Oryza sativa
NAC GCM domain factors
UN0429.2 UN0429 2 ONAC127 Oryza sativa
NAC GCM domain factors
UN0430.2 UN0430 2 ONAC127 Oryza sativa
NAC GCM domain factors
     

-log(P-value) = 1.8e-06

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: