Detailed information of matrix profile UN0439.1

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Profile summary

Name: AP2-b
Matrix ID: UN0439.1
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 253 240 303 249 222 117 44 4 19 56 748 60 10 56 179 341 302 297 257 232 ]
C [ 275 282 221 211 256 329 722 955 782 753 88 18 12 388 345 237 226 216 250 259 ]
G [ 251 219 220 188 249 427 202 15 73 103 98 912 974 504 325 235 190 244 247 281 ]
T [ 221 259 256 353 273 127 33 25 127 88 66 10 4 52 151 186 281 244 247 228 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0439.1 UN0439 1 AP2-b Ciona intestinalis
AP-2 Basic helix-span-helix factors (bHSH)
UN0439.2 UN0439 2 AP2-b Ciona intestinalis
AP-2 Basic helix-span-helix factors (bHSH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: