Detailed information of matrix profile UN0459.1

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Profile summary

Name: NR2C1-2
Matrix ID: UN0459.1
Class: Nuclear receptors with C4 zinc fingers
Family: XR-related receptors (NR2)
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 284 210 179 231 251 50 277 839 81 22 14 89 27 125 793 184 80 67 153 255 247 275 ]
C [ 194 327 431 325 208 177 104 121 888 917 111 113 59 97 78 676 818 521 466 224 302 317 ]
G [ 365 211 151 151 201 85 574 25 16 9 16 21 23 723 87 56 40 66 115 153 261 220 ]
T [ 157 253 238 293 341 687 45 16 16 52 859 776 890 55 42 84 62 345 267 368 189 189 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0459.1 UN0459 1 NR2C1-2 Ciona intestinalis
XR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
UN0459.2 UN0459 2 NR2C1-2 Ciona intestinalis
XR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: