Detailed information of matrix profile UN0461.1

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Profile summary

Name: p53-a
Matrix ID: UN0461.1
Class: p53 domain factors
Family: p53-related factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 282 227 174 169 203 155 400 82 685 6 503 30 4 10 8 48 410 281 312 215 282 240 ]
C [ 269 268 221 379 400 333 41 11 13 984 108 74 7 867 973 717 129 206 203 392 273 266 ]
G [ 210 224 434 165 152 94 512 892 288 4 65 15 986 9 6 24 321 322 311 208 229 231 ]
T [ 240 280 171 288 244 417 48 15 14 6 325 881 3 115 14 211 140 191 174 185 216 263 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0461.1 UN0461 1 p53-a Ciona intestinalis
p53-related factors p53 domain factors
UN0461.2 UN0461 2 p53-a Ciona intestinalis
p53-related factors p53 domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: