Detailed information of matrix profile UN0467.1

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Profile summary

Name: Prox-a
Matrix ID: UN0467.1
Class: Homeo domain factors
Family: HD-PROS factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2W9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 287 307 318 286 238 130 61 31 19 898 961 14 861 217 251 170 207 221 238 275 ]
C [ 225 214 219 296 204 299 619 85 212 9 12 10 16 432 103 320 297 257 259 266 ]
G [ 263 264 264 158 285 100 86 42 61 86 18 969 86 100 367 170 179 216 218 227 ]
T [ 225 215 200 260 273 470 234 841 708 6 8 7 37 251 280 341 316 306 285 232 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0467.1 UN0467 1 Prox-a Ciona intestinalis
HD-PROS factors Homeo domain factors
UN0467.2 UN0467 2 Prox-a Ciona intestinalis
HD-PROS factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: