Detailed information of matrix profile UN0469.1

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Profile summary

Name: Six1-2
Matrix ID: UN0469.1
Class: Homeo domain factors
Family: HD-SINE
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 250 244 274 338 416 262 309 53 83 884 66 900 35 238 239 263 351 261 285 245 ]
C [ 262 223 228 248 195 290 240 75 34 23 72 50 846 340 298 235 211 271 297 331 ]
G [ 237 314 221 186 173 180 220 50 826 22 25 26 41 235 224 243 192 198 190 198 ]
T [ 251 219 277 228 216 267 231 823 57 71 837 24 77 187 239 259 246 270 228 226 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0469.1 UN0469 1 Six1-2 Ciona intestinalis
HD-SINE Homeo domain factors
UN0469.2 UN0469 2 Six1-2 Ciona intestinalis
HD-SINE Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: