Detailed information of matrix profile UN0493.1

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Profile summary

Name: E2F3::ONECUT2
Matrix ID: UN0493.1
Class: Fork head/winged helix factors::Homeo domain factors
Family: E2F::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O00716   O95948  
Source: 26550823
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 678 1159 0 2 595 1903 109 1421 1082 730 539 177 10 0 33 0 275 608 670 ]
C [ 314 130 11 1903 121 0 0 96 126 267 160 966 122 1903 37 1903 1081 591 315 ]
G [ 701 744 15 0 1903 17 0 141 132 164 496 937 1903 59 1903 17 822 149 248 ]
T [ 211 113 1903 26 31 232 1903 245 563 742 709 136 4 18 25 59 238 556 670 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0492.1 UN0492 1 E2F3::ONECUT2 Homo sapiens
E2F::HD-CUT Fork head/winged helix factors::Homeo domain factors
UN0493.1 UN0493 1 E2F3::ONECUT2 Homo sapiens
E2F::HD-CUT Fork head/winged helix factors::Homeo domain factors
UN0492.2 UN0492 2 E2F3::ONECUT2 Homo sapiens
E2F::HD-CUT Fork head/winged helix factors::Homeo domain factors
UN0493.2 UN0493 2 E2F3::ONECUT2 Homo sapiens
E2F::HD-CUT Fork head/winged helix factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: