Detailed information of matrix profile UN0498.1

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Profile summary

Name: ELK1::HOXA3
Matrix ID: UN0498.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O43365   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1044 321 361 107 145 4576 2123 2123 180 131 884 0 ]
C [ 334 1496 2123 103 340 59 0 11 560 311 134 0 ]
G [ 1079 627 55 2123 2123 60 183 179 364 923 1239 0 ]
T [ 500 155 272 79 224 2123 6 0 2123 1199 469 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0498.1 UN0498 1 ELK1::HOXA3 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
UN0498.2 UN0498 2 ELK1::HOXA3 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: