Detailed information of matrix profile UN0517.1

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Profile summary

Name: ETV2::NHLH1
Matrix ID: UN0517.1
Class: Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
Family: Ets-related::Tal-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q02575   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 2235 3994 794 1734 219 5 2 4 0 20 6371 4 141 0 5 261 159 ]
C [ 1263 2 4715 0 0 6371 6371 0 36 6371 8 170 6371 122 0 6371 1093 ]
G [ 1156 2378 94 222 0 5 17 6371 6371 5 5 6371 1680 3 6371 190 2203 ]
T [ 1717 5 1657 4638 6371 39 0 0 5 152 8 20 0 6371 2 659 2917 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0517.1 UN0517 1 ETV2::NHLH1 Homo sapiens
Ets-related::Tal-related Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
UN0517.2 UN0517 2 ETV2::NHLH1 Homo sapiens
Ets-related::Tal-related Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: