results/JASPAR_2022_matrix_clustering/urochordates/CORE/interactive_trees/JASPAR_2022_matrix_clustering_urochordates_CORE_tables/alignment_table.tab


id name cluster strand offset_up offset_down width aligned_consensus aligned_consensus_rc
JASPAR_2022_urochordates_CORE_m42_MA1883_1 Hox1 cluster_1 D 1 2 23 +wwwwwwwTTAATTawwwwww++ ++WWWWWWTAATTAAWWWWWWW+
JASPAR_2022_urochordates_CORE_m54_MA1895_1 Lhx3/4 cluster_1 D 1 2 23 +wwwwwwaTTAATTaawwwww++ ++WWWWWTTAATTAATWWWWWW+
JASPAR_2022_urochordates_CORE_m40_MA1881_1 Hmbox1 cluster_1 D 1 2 23 +ddwwwawTTAATTaawtttt++ ++AAAAWTTAATTAAWTWWWHH+
JASPAR_2022_urochordates_CORE_m55_MA1896_1 Lmx-b cluster_1 D 1 2 23 +wwwwwaatTAATTaawtwww++ ++WWWAWTTAATTAATTWWWWW+
JASPAR_2022_urochordates_CORE_m69_MA1910_1 Rax cluster_1 D 1 2 23 +WWWAWYYAATTAATTWAWWW++ ++wwwtwaaTTAATTrrwtwww+
JASPAR_2022_urochordates_CORE_m44_MA1885_1 Hox4 cluster_1 D 2 1 23 ++wwwwwraTmATTAwykwwww+ +WWWWMRWTAATKATYWWWWW++
JASPAR_2022_urochordates_CORE_m57_MA1898_1 Meox cluster_1 R 2 1 23 ++WWWWWRRTMATTAATWWWWW+ +wwwwwatTAATkAyywwwww++
JASPAR_2022_urochordates_CORE_m3_MA1844_1 Atbf cluster_1 D 1 2 23 +wwwwwaatTAATTamwwwww++ ++WWWWWKTAATTAATTWWWWW+
JASPAR_2022_urochordates_CORE_m41_MA1882_1 Hnf1 cluster_1 D 1 2 23 +wwwwwaatTAATTrvwwwww++ ++WWWWWBYAATTAATTWWWWW+
JASPAR_2022_urochordates_CORE_m11_MA1852_1 Emx cluster_1 D 2 1 23 ++wwttdryTAATTGrkkwwww+ +WWWWMMYCAATTARYHAAWW++
JASPAR_2022_urochordates_CORE_m45_MA1886_1 Hox5 cluster_1 D 2 1 23 ++wwwwwrtTAATTGsttwtww+ +WWAWAASCAATTAAYWWWWW++
JASPAR_2022_urochordates_CORE_m64_MA1905_1 Nkx3 cluster_1 D 1 2 23 +WWWHMBYAATTAATKAWWWW++ ++wwwwtmaTTAATTrvkdwww+
JASPAR_2022_urochordates_CORE_m38_MA1879_1 Hex cluster_1 D 1 2 23 +wwwwywaTTAATTrmtwwww++ ++WWWWAKYAATTAATWRWWWW+
JASPAR_2022_urochordates_CORE_m63_MA1904_1 Nk-3 cluster_1 D 1 2 23 +wwwttaaTTAATTrrtwwww++ ++WWWWAYYAATTAATTAAWWW+
JASPAR_2022_urochordates_CORE_m83_MA1924_1 Tlx cluster_1 R 1 2 23 +WWWWWWWTTAATTRWWWWWW++ ++wwwwwwyAATTAAwwwwwww+
JASPAR_2022_urochordates_CORE_m65_MA1906_1 Noto cluster_1 R 2 1 23 ++WWWWWVMTCATTARYWWWWW+ +wwwwwryTAATgAkbwwwww++
JASPAR_2022_urochordates_CORE_m48_MA1889_1 Isx cluster_1 D 1 2 23 +wwwtwawTTAATTarattww++ ++WWAATYTAATTAAWTWAWWW+
JASPAR_2022_urochordates_CORE_m68_MA1909_1 Prop cluster_1 D 1 2 23 +ddttwawTTAATTwrattwm++ ++KWAATYWAATTAAWTWAAHH+
JASPAR_2022_urochordates_CORE_m60_MA1901_1 Msx cluster_1 D 2 1 23 ++WWWWAMSYAATTAMYYAWWW+ +wwwtrrkTAATTrsktwwww++
JASPAR_2022_urochordates_CORE_m84_MA1925_1 Uncx-b cluster_1 D 1 2 23 +WWWAWWWAATTAAWTWWWWW++ ++wwwwwawTTAATTwwwtwww+
JASPAR_2022_urochordates_CORE_m59_MA1900_1 Mnx cluster_1 D 1 2 23 +WWWWWTYAATTAAWWWWWWW++ ++wwwwwwwtTAATTrawwwww+
JASPAR_2022_urochordates_CORE_m43_MA1884_1 Hox3 cluster_1 R 2 1 23 ++WWWWWWATCATTAWYWWWWW+ +wwwwwrwTAATgAtwwwwww++
JASPAR_2022_urochordates_CORE_m6_MA1847_1 Bsx cluster_1 D 2 1 23 ++WWWWVRSCAATTAWSKCMTW+ +wakgmswTAATTGsybwwww++
JASPAR_2022_urochordates_CORE_m9_MA1850_1 Dlx-b cluster_1 R 0 1 23 WWWWWRSGGTAATTAYCSYHWW+ +wwdrsgrTAATTAccsywwwww
JASPAR_2022_urochordates_CORE_m10_MA1851_1 Dlx-c cluster_1 D 0 1 23 wwwwwrrgaTAATTAyytwwww+ +WWWWARRTAATTATCYYWWWWW
JASPAR_2022_urochordates_CORE_m62_MA1903_1 Nk-1 cluster_1 R 2 1 23 ++DKKKKKTTAATTGRWWWWWD+ +hwwwwwyCAATTAammmmmh++
JASPAR_2022_urochordates_CORE_m66_MA1907_1 Otp cluster_1 D 1 2 23 +WWWAWTTAATTAAWTWWWWW++ ++wwwwwawTTAATTaawtwww+
JASPAR_2022_urochordates_CORE_m35_MA1876_1 Gsx cluster_1 D 0 3 23 AWWDSYAATTAAAWWSYMAT+++ +++AtkrswwtTTAATtrshwwT
JASPAR_2022_urochordates_CORE_m67_MA1908_1 Otx cluster_1 D 1 0 23 +DWWWWWKCGGATTAAKBYKWWW wwwmrvmtTAATCCgmwwwwwh+
JASPAR_2022_urochordates_CORE_m21_MA1862_1 FoxD-b cluster_2 R 1 2 23 +AMHWAWATAAACAWWMAHWW++ ++wwdtkwwTGTTTatwtwdkt+
JASPAR_2022_urochordates_CORE_m29_MA1870_1 FoxL2 cluster_2 D 1 2 23 +awwwawaTAAACAaamamam++ ++KTKTKTTTGTTTATWTWWWT+
JASPAR_2022_urochordates_CORE_m28_MA1869_1 FoxK cluster_2 R 1 2 23 +WWAWAWRTAAACAMAMMMMM++ ++kkkkktkTGTTTaywtwtww+
JASPAR_2022_urochordates_CORE_m25_MA1866_1 FoxI-a cluster_2 D 2 1 23 ++aaaamahAAACAAammmmmm+ +KKKKKKTTTGTTTDTKTTTT++
JASPAR_2022_urochordates_CORE_m30_MA1871_1 FoxM cluster_2 D 2 1 23 ++maaaaamAAACAAaaamaam+ +KTTKTTTTTGTTTKTTTTTK++
JASPAR_2022_urochordates_CORE_m22_MA1863_1 FoxE cluster_2 R 2 1 23 ++MYWAWAWAAACAAMMMMWHH+ +ddwkkkkTTGTTTwtwtwrk++
JASPAR_2022_urochordates_CORE_m19_MA1860_1 FoxA-b cluster_2 R 1 0 23 +WWWWRWRYAAATATTTRHWHWW wwdwdyaAATATTTrywywwww+
JASPAR_2022_urochordates_CORE_m20_MA1861_1 FoxB cluster_2 D 1 0 23 +hmwwawgYAAATATTkrywtwd HWAWRYMAATATTTRCWTWWKD+
JASPAR_2022_urochordates_CORE_m26_MA1867_1 FoxI-b cluster_2 R 1 2 23 +TDTWWWRTAAACAWWAAMAW++ ++wtkttwwTGTTTAywwwaha+
JASPAR_2022_urochordates_CORE_m23_MA1864_1 FoxF cluster_2 D 1 2 23 +wwwwawaTAAAyAwwyamah++ ++DTKTRWWTRTTTATWTWWWW+
JASPAR_2022_urochordates_CORE_m27_MA1868_1 FoxI-c cluster_2 R 2 1 23 ++YMMVWMAAAACATMSTMSDY+ +rhskaskATGTTTtkwbkkr++
JASPAR_2022_urochordates_CORE_m31_MA1872_1 FoxO cluster_2 R 2 1 23 ++WAAAMRWAAACATGTTTWYW+ +wrwaaacATGTTTwyktttw++
JASPAR_2022_urochordates_CORE_m24_MA1865_1 FoxG cluster_2 R 1 2 23 +MMMMMMACAAACAMMMMMMM++ ++kkkkkkkTGTTTGtkkkkkk+
JASPAR_2022_urochordates_CORE_m18_MA1859_1 FoxA-a cluster_2 D 0 3 23 kcmyTAwGTAAACAAwvvmw+++ +++WKBBWTTGTTTACWTARKGM
JASPAR_2022_urochordates_CORE_m32_MA1873_1 FoxQ cluster_2 R 0 3 23 WWWWWWWATAAACWWWWWWW+++ +++wwwwwwwGTTTATwwwwwww
JASPAR_2022_urochordates_CORE_m13_MA1854_1 Etv1/4/5 cluster_3 R 1 2 23 +GKGRSKWCCGGAARYRVSSY++ ++rssbyryTTCCGGwmsycmc+
JASPAR_2022_urochordates_CORE_m16_MA1857_1 Fli-Erg-c cluster_3 D 1 2 23 +ammamwwCCGGAAryraaaw++ ++WTTTYRYTTCCGGWWKTKKT+
JASPAR_2022_urochordates_CORE_m14_MA1855_1 Fli-Erg-a cluster_3 D 1 2 23 +ybcmcywCCGGAAryvmvmm++ ++KKBKBRYTTCCGGWRGKGVR+
JASPAR_2022_urochordates_CORE_m15_MA1856_1 Fli-Erg-b cluster_3 R 0 1 23 MMCCVAAACCGGAARYRVRRHY+ +rdyybyryTTCCGGtttbggkk
JASPAR_2022_urochordates_CORE_m12_MA1853_1 Erf-a cluster_3 D 3 0 23 +++TTTTKKYACTTCCGKTYYYY rrrramcGGAAGTrmmaaaa+++
JASPAR_2022_urochordates_CORE_m75_MA1916_1 SoxB2 cluster_4 D 1 0 21 +wwwwkyyATTGTTttytttw WAAARAAAACAATRRMWWWW+
JASPAR_2022_urochordates_CORE_m77_MA1918_1 SoxF cluster_4 D 1 0 21 +awwwwyhATTGTthtttwww WWWAAADAACAATDRWWWWT+
JASPAR_2022_urochordates_CORE_m76_MA1917_1 SoxC cluster_4 D 1 0 21 +WWWAAAAAACAATDAWWWWK mwwwwthATTGTTttttwww+
JASPAR_2022_urochordates_CORE_m74_MA1915_1 SoxB1 cluster_4 D 0 1 21 WMMAAWAACAATGWHAWTKK+ +mmAwtdwcATTGTtwttkkw
JASPAR_2022_urochordates_CORE_m53_MA1894_1 large-Maf cluster_5 D 0 0 20 wwwwwwwTGCTGAckhagca TGCTDMGTCAGCAWWWWWWW
JASPAR_2022_urochordates_CORE_m72_MA1913_1 small-Maf cluster_5 D 0 0 20 kdrwwwwTGCTGAykyarsm KSYTRMRTCAGCAWWWWYHM
JASPAR_2022_urochordates_CORE_m36_MA1877_1 Hes-b cluster_6 R 1 0 23 +CGMCWGRCACGTGCCACCCSCS sgsgggtGgCACGTGycwgkcg+
JASPAR_2022_urochordates_CORE_m39_MA1880_1 Hey cluster_6 D 1 0 23 +sssssgrCACGTGccvcsbsss SSSVSGBGGCACGTGYCSSSSS+
JASPAR_2022_urochordates_CORE_m58_MA1899_1 Mitf cluster_6 R 0 3 23 SGGSRSRTCACGTGAYKBSS+++ +++ssvmrtCACGTGAysysccs
JASPAR_2022_urochordates_CORE_m85_MA1926_1 Usf cluster_6 R 0 3 23 TWTYWDRTCACGTGAYYWDT+++ +++ahwrrtCACGTGayhwrawa
JASPAR_2022_urochordates_CORE_m37_MA1878_1 Hes-c cluster_6 R 1 0 23 +YGYVHSRCACGCGCCWSRCRCG cgygyswggCGCGTGysdbrcr+
JASPAR_2022_urochordates_CORE_m56_MA1897_1 Max cluster_6 D 1 2 23 +KGKTDRMCACGTGKYHAMCM++ ++kgktdrmCACGTGkyhamcm+
JASPAR_2022_urochordates_CORE_m51_MA1892_1 Klf5-like cluster_7 D 1 1 22 +cccssccACGCCChmmcccc+ +GGGGKKDGGGCGTGGSSGGG+
JASPAR_2022_urochordates_CORE_m52_MA1893_1 Klf6-7-like cluster_7 D 1 1 22 +ccccvcCACrCCCmmccccc+ +GGGGGKKGGGYGTGGBGGGG+
JASPAR_2022_urochordates_CORE_m50_MA1891_1 Klf3/8/12 cluster_7 D 1 1 22 +KGGKKKTGGGYGTGGYMKKK+ +mmmkrCCACrCCCammmccm+
JASPAR_2022_urochordates_CORE_m49_MA1890_1 Klf15 cluster_7 D 0 0 22 GKKKGGGGGGGYGTGKSGGGGG cccccsmCACrCCCCcccmmmc
JASPAR_2022_urochordates_CORE_m33_MA1874_1 GATA-a cluster_8 D 0 0 20 wwwwwrctGATAAsrwawhh DDWTWYSTTATCAGYWWWWW
JASPAR_2022_urochordates_CORE_m34_MA1875_1 GATA1/2/3 cluster_8 D 0 0 20 wwwdwwraGATAAgmwwwww WWWWWKCTTATCTYWWHWWW
JASPAR_2022_urochordates_CORE_m71_MA1912_1 Six3/6 cluster_8 D 0 0 20 DWDWRSSGTATCAWWTWCAW wtgwawwTGATACssywhwh
JASPAR_2022_urochordates_CORE_m73_MA1914_1 Snail cluster_9 R 0 1 21 KKKGKDRCAGGTGYRBKKKK+ +mmmmvyrCACCTGyhmcmmm
JASPAR_2022_urochordates_CORE_m82_MA1923_1 Tcf3-4-12 cluster_9 R 0 1 21 YRGGTGRCAGGTGKSASSYG+ +crsstsmCACCTGycaccyr
JASPAR_2022_urochordates_CORE_m2_MA1843_1 AP4 cluster_9 D 1 0 21 +gwwrawCAGCTGathawcar YTGWTDATCAGCTGWTYWWC+
JASPAR_2022_urochordates_CORE_m4_MA1845_1 Atoh7 cluster_9 D 1 0 21 +gvryraCAGCTGTyrybscs SGSVRYRACAGCTGTYRYBC+
JASPAR_2022_urochordates_CORE_m5_MA1846_1 Brachyury cluster_10 D 0 1 23 mrcrcrtAgGTGTGAawtttsg+ +CSAAAWTTCACACCTAYGYGYK
JASPAR_2022_urochordates_CORE_m79_MA1920_1 Tbox-b cluster_10 D 0 1 23 cyytwrrAGGTGygAawwwymm+ +KKRWWWTTCRCACCTYYWARRG
JASPAR_2022_urochordates_CORE_m78_MA1919_1 Tbox-a cluster_10 D 1 0 23 +SCMMMMWTTCACACCYYCMCCC gggkgrrGGTGTGAawkkkkgs+
JASPAR_2022_urochordates_CORE_m81_MA1922_1 Tbx2/3 cluster_10 D 2 1 23 ++KKKKAWWTCACACCTYYTTY+ +raarrAgGTGTgAwwtmmmm++
JASPAR_2022_urochordates_CORE_m80_MA1921_1 Tbx15/18/22 cluster_10 D 0 1 23 GGTGWBATCACACCTYYCMYMM+ +kkrkgrrAGGTGTgAtvwCaCc
JASPAR_2022_urochordates_CORE_m8_MA1849_1 Creb1 cluster_11 D 0 0 22 aaakytrTGACGTCAyarmttt AAAKYTRTGACGTCAYARMTTT
JASPAR_2022_urochordates_CORE_m17_MA1858_1 Fos-b cluster_11 R 2 0 22 ++MAGDATGACGTCATHSTKWM kwmasdATGACGTCAThctk++
JASPAR_2022_urochordates_CORE_m61_MA1902_1 NFkb cluster_12 D 0 0 22 vmaaarGGGGAATcCCCctwyy RRWAGGGGGATTCCCCYTTTKB
JASPAR_2022_urochordates_CORE_m70_MA1911_1 Rel cluster_12 D 1 1 22 +kkkkkkgGGAATTyccsydk+ +MHRSGGRAATTCCCMMMMMM+
JASPAR_2022_urochordates_CORE_m7_MA1848_1 Cebpg cluster_13 D 0 0 20 rrvmrrtATTGCAhyahwky RMWDTRDTGCAATAYYKBYY
JASPAR_2022_urochordates_CORE_m46_MA1887_1 Hsf1-2-4 cluster_14 D 0 0 20 tmGAaydTTCTAGAAhdttc GAAHDTTCTAGAAHRTTCKA
JASPAR_2022_urochordates_CORE_m47_MA1888_1 Irf-b cluster_15 D 0 0 22 GAdActrgAGTwTCGyttykyk MRMRAARCGAWACTCYAGTHTC
JASPAR_2022_urochordates_CORE_m86_MA1927_1 YY1-2 cluster_16 D 0 0 22 srgcsgCCATwATGGcggcyby RVRGCCGCCATWATGGCSGCYS
JASPAR_2022_urochordates_CORE_m1_MA0118_1 Macho-1 cluster_17 D 0 0 9 ygGGkGkym KRMCMCCCR