Detailed information of matrix profile MA0078.3

  1. Home
  2. Matrix > MA0078.3

Profile summary
Name: Sox17
Matrix ID: MA0078.3
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 8636240
Uniprot ID: Q61473  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 870 471 10955 114 136 285 182 907 2044 1605 ]
C [ 9181 10241 189 281 105 490 163 1561 6638 1889 ]
G [ 1012 251 138 258 140 11241 124 1111 885 957 ]
T [ 1224 1324 1005 11634 11906 271 11818 8708 2720 7836 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0078.1 MA0078 1 Sox17 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
MA0078.2 MA0078 2 Sox17 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
MA0078.3 MA0078 3 Sox17 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
     

-log(P-value) = 30.3023

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: