Detailed information of matrix profile MA0467.2

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Profile summary
Name: Crx
Matrix ID: MA0467.2
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 20463752
Uniprot ID: O54751  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 850 892 44 4238 4281 47 71 30 767 1004 ]
C [ 1127 1353 23 20 9 42 4200 4129 1399 1358 ]
G [ 1151 739 25 25 32 17 36 155 670 923 ]
T [ 1205 1349 4241 50 11 4227 26 19 1497 1048 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0467.1 MA0467 1 Crx Mus musculus
Paired-related HD factors Homeo domain factors
MA0467.2 MA0467 2 Crx Mus musculus
Paired-related HD factors Homeo domain factors
MA0467.3 MA0467 3 Crx Mus musculus
Paired-related HD factors Homeo domain factors
     

-log(P-value) = 1319.1

TFFM details

TFFM ID: TFFM0723.1

ChIP-seq Centrality
-log(P-value): 3713.46

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0723.1

ChIP-seq Centrality
-log(P-value): 3224.1

TFFM detailed summary logos

Description:

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GC Content: