Detailed information of matrix profile MA0516.3

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Profile summary
Name: SP2
Matrix ID: MA0516.3
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 14726517
Uniprot ID: Q02086  
Source: 27852650
Comment:

Sequence logo

Frequency matrix

         
A [ 18 1 24 1 1 1 1 1 80 ]
C [ 611 878 974 998 1 998 998 831 766 ]
G [ 165 1 1 1 886 1 1 1 1 ]
T [ 206 121 1 1 112 1 1 168 153 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0516.1 MA0516 1 SP2 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0516.2 MA0516 2 SP2 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0516.3 MA0516 3 SP2 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0735.1

ChIP-seq Centrality
-log(P-value): 2737.68

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0735.1

ChIP-seq Centrality
-log(P-value): 3032.98

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: