Detailed information of matrix profile MA0631.2

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Profile summary
Name: Six3
Matrix ID: MA0631.2
Class: Homeo domain factors
Family: HD-SINE
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: PBM
Validation: 18585360
Uniprot ID: Q62233  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 2 1 99 0 95 0 7 4 10 55 12 ]
C [ 3 0 0 3 4 83 90 82 32 17 8 ]
G [ 3 97 0 0 0 1 2 7 10 5 8 ]
T [ 92 1 0 97 0 16 2 7 47 23 72 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0631.1 MA0631 1 Six3 Mus musculus
HD-SINE Homeo domain factors
MA0631.2 MA0631 2 Six3 Mus musculus
HD-SINE Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: