Detailed information of matrix profile MA0647.2

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Profile summary
Name: GRHL1
Matrix ID: MA0647.2
Class: Grainyhead domain factors
Family: Grainyhead-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18288204
Uniprot ID: Q9NZI5  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2491 2491 2491 0 200 221 0 28 62 418 ]
C [ 244 12 2 2491 2491 51 0 7 112 409 ]
G [ 537 186 4 1 52 2491 2491 1 3 109 ]
T [ 761 127 76 0 332 371 0 2491 2491 2491 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0647.1 MA0647 1 GRHL1 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
MA0647.2 MA0647 2 GRHL1 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: