Detailed information of matrix profile MA0651.2

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Profile summary
Name: HOXC11
Matrix ID: MA0651.2
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 18585359
Uniprot ID: O43248  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 4325 1044 39 32 3173 15350 0 7 15350 0 776 2757 ]
C [ 1401 467 45 0 10 0 14810 20 58 14042 10927 2098 ]
G [ 3911 848 22 0 0 0 0 15350 238 631 777 1684 ]
T [ 5712 15350 15350 15350 12177 0 540 199 44 1308 4423 8810 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0651.1 MA0651 1 HOXC11 Homo sapiens
HOX Homeo domain factors
MA0651.2 MA0651 2 HOXC11 Homo sapiens
HOX Homeo domain factors
MA0651.3 MA0651 3 HOXC11 Homo sapiens
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: