Detailed information of matrix profile MA0682.2

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Profile summary
Name: PITX1
Matrix ID: MA0682.2
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8675014
Uniprot ID: P78337  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2113 547 141 10531 0 0 10531 4432 ]
C [ 1876 134 0 1039 0 0 0 2382 ]
G [ 4194 10531 10531 0 0 0 0 6099 ]
T [ 2348 68 143 0 10531 10531 0 2898 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0682.1 MA0682 1 Pitx1 Mus musculus
Paired-related HD factors Homeo domain factors
MA0682.2 MA0682 2 PITX1 Homo sapiens
Paired-related HD factors Homeo domain factors
MA0682.3 MA0682 3 PITX1 Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0559.1

ChIP-seq Centrality
-log(P-value): 3142.81

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0559.1

ChIP-seq Centrality
-log(P-value): 3161.41

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: