Detailed information of matrix profile MA0745.2

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Profile summary
Name: SNAI2
Matrix ID: MA0745.2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23332764
Uniprot ID: O43623  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 17906 8917 8747 37272 126 45229 344 234 227 622 2359 16344 9958 ]
C [ 8219 12297 6281 1263 45257 196 487 326 424 323 26742 9490 11169 ]
G [ 13476 11016 18771 6467 254 313 44739 45144 202 44463 6393 12314 10031 ]
T [ 6215 13586 12017 814 179 78 246 112 44963 408 10322 7668 14658 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0745.1 MA0745 1 SNAI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0745.2 MA0745 2 SNAI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0745.3 MA0745 3 SNAI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0203.2

ChIP-seq Centrality
-log(P-value): 40784.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0203.2

ChIP-seq Centrality
-log(P-value): 40552.6

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: